BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F09LP1|AL429258
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1678 1761 0.0
>3x_Contig1678
Length = 12472
Score = 1761 bits (884), Expect = 0.0
Identities = 914/928 (98%), Gaps = 1/928 (0%)
Strand = Plus / Minus
Query: 1 gatcattttcgggtacaggcagtnccaaactgattgaaatcttggtatcataactatcct 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1425 gatcattttcgggtacaggcagttccaaactgattgaaatcttggtatcataactatcct 1366
Query: 61 ttggggagtacaataaaatctgtgaaattttccgtttttcaataaattgtgcaattcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1365 ttggggagtacaataaaatctgtgaaattttccgtttttcaataaattgtgcaattcttc 1306
Query: 121 cggtgttaacatctcttgtcattctcaaaaacttcggcctttccgtatgagttcttactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1305 cggtgttaacatctcttgtcattctcaaaaacttcggcctttccgtatgagttcttactc 1246
Query: 181 tatagctcaagtctgaggcatgagaatctattatattaaactttcccatattttcattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 tatagctcaagtctgaggcatgagaatctattatattaaactttcccatattttcattta 1186
Query: 241 attcagataagttctttatgtatctgttgaactcatcaaaaactctttcatcaacatccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 attcagataagttctttatgtatctgttgaactcatcaaaaactctttcatcaacatccg 1126
Query: 301 gcttcattgtggagtcaagatctgtgaaaacgcattgagaggacaccggagggttaacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 gcttcattgtggagtcaagatctgtgaaaacgcattgagaggacaccggagggttaacac 1066
Query: 361 gattagaggtcgatggatcaatgataagaccgtatttcatttccacttcaatgaattgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 gattagaggtcgatggatcaatgataagaccgtatttcatttccacttcaatgaattgcc 1006
Query: 421 tnagttccggttctactgcmatcaacgtagcataaatccaatcttggacggattttgtca 480
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 ttagttccggttctactgcaatcaacgtagcataaatccaatcttggacggattttgtca 946
Query: 481 agtcatcttctggaataaatcctaaaawagagtcgtcaagtttaagatttgaagaatcaa 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 945 agtcatcttctggaataaatcctaaaatagagtcgtcaagtttaagatttgaagaatcaa 886
Query: 541 tggcttgtmaag-cttgacagtcggtttccattttcttgcccagataggcggaacattgt 599
|||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 885 tggcttgtaaagccttgacagtaggtttccattttcttgcccagataggcggaacattgt 826
Query: 600 atcttttaggtagcgaagaggaagagagtacacttaggatcttcaagtccttcttgatgt 659
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 825 atcttttaggtagcgaagaggaagagagttcacttaggatcttcaagtccttcttgatgt 766
Query: 660 tgttcttcacagaagcattacttgtcttttgctgaaagatgtmcttctcctttttcgaat 719
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 765 tgttcttcacagaagcattacttgtcttttgctgaaagatgtccttctcctttttcgaat 706
Query: 720 cctctttggattgcttggcaggttccactgawttcttaccatcttgttccactggttcga 779
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 705 cctctttggattgcttggcaggttccactgatttcttaccatcttgttccactggttcga 646
Query: 780 cttcttgtttgatcccgttttcctttttttgcgtttccactttattatcagctttatccg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cttcttgtttgatcccgttttcctttttttgcgtttccactttattatcagctttatccg 586
Query: 840 catccyctacgggaatatctccttcatcttttgtttttggagaatgcyctttgacgggtt 899
||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 585 catcctctacgggaatatctccttcatcttttgtttttggagattgctctttgacgggtt 526
Query: 900 ttgagttcagctgaatctccttagttgc 927
|||||| |||||||||||||||||||||
Sbjct: 525 ttgagtccagctgaatctccttagttgc 498
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7728
Number of Sequences: 1807
Number of extensions: 7728
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)